Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907264.1_cds_XP_016457402.1_51131
CDS Infomation

[gene=LOC107781241] [db_xref=GeneID:107781241] [protein=probable protein phosphatase 2C 60] [protein_id=XP_016457402.1] [location=complement(join(6036..6335,12584..12638,14927..14979,16343..16419,16641..16764,17016..17141,17349..17502,20765..20873,21586..21649,22782..22898))] [gbkey=CDS]
Sequence

ATGGGTATATACCTGAGTACTCCGAAAACGGAGAAATTTTCAGAAGATGGTGAGAATGTT
AAGGTTAGATATGGTTTATCATCAATGCAAGGATGGCGAGCAACTATGGAAGATGCTCAT
GCAGCAATTACTGACTTGGATGCTTCCACTTCCTTTTTTGGTGTCTATGATGGTCATGGA
GGTAAAGTTGTTGCTAAATTTTGTGCCAAGTATCTACATCAGCAAGTGCTGAAGCATGAA
GCATATCTGCAAGGAGATATTGGAACTTCAGTCCAGAAAGCCTTTTTCAGAATGGATGAG
ATGATGCGTGGTCAGAGAGGATGGAGGGAGCTGGCTGCGTTAGGGGATAGATTAAACAAG
TTTACGGGTATGATAGAGGGTCTTATATGGTCTCCAAGAAATGGTGATGGAAACGGCAAT
ACTGATGATTGGGCCTTTGAGGAGGGGCCTCACTCTGATTTTCCTGGACCAACTTCTGGA
AGTACGGCTTGTGTTGCAATCATTAGAGAGAACCAAGTCACTGTTGCGAATGCTGGTGAT
TCTCGTTGTGTGATTTCACGTAAGGGCCAGGCGTATAATCTATCAAGGGATCACAAACCT
GATCTTGAGATTGAAAGAGAGAGGATCCTGAAAGCAGGTGGTTTCATCCACGCAGGACGT
GTTAATGGTAGCTTAAATCTTGCAAGAGCTATAGGTGACATGGAATTCAAGCAGAATAAG
TTTTTGCCAGCTGAGAAGCAAGTTGTTACAGCCGATCCAGACATAAATATTGTTGAACTA
TGCGATGATGATGATTTTATTGTGCTAGCCTGTGATGGTGTGTGGGACTGCATGTCGAGC
CAGCAATTAGTGGACTTTATACATGAGCAGCTGAACTCGGAATCCAAGCTTTCAGTGGTA
TGTGAAAGAGTTCTTGATCGGTGTTTGGCACCTACTGCTGGAGGTGAAGGATGCGATAAT
ATGACCATGATTTTAGTACAACTCAAAAAACCTATTCTCTCCGGGGCTTCTCCACGTGAT
GAACCATCGGCTTCTCCAGGCGAACCATCGGCTTCTCCATGTGATGAACCATTGGCTTCT
CCAGGTGATGAGCTGTCAGCTTCGAGTGAGAAACTCCCTGCTTCAGATGATGTAAGTGCT
GAATCAAAACCAGCAGCAGAGTGTGGATCAAGTTCATAG

Peptide Sequence

PEP ID

XP_016457402.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 60 [Nicotiana tabacum]
Sequence

MGIYLSTPKTEKFSEDGENVKVRYGLSSMQGWRATMEDAHAAITDLDASTSFFGVYDGHG
GKVVAKFCAKYLHQQVLKHEAYLQGDIGTSVQKAFFRMDEMMRGQRGWRELAALGDRLNK
FTGMIEGLIWSPRNGDGNGNTDDWAFEEGPHSDFPGPTSGSTACVAIIRENQVTVANAGD
SRCVISRKGQAYNLSRDHKPDLEIERERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNK
FLPAEKQVVTADPDINIVELCDDDDFIVLACDGVWDCMSSQQLVDFIHEQLNSESKLSVV
CERVLDRCLAPTAGGEGCDNMTMILVQLKKPILSGASPRDEPSASPGEPSASPCDEPLAS
PGDELSASSEKLPASDDVSAESKPAAECGSSS

Transcript Sequence

Gene sequence data has not been registered.